A selection of relevant publications from the laboratories which have set the stage for the 1002 Yeast Genomes project:

Comprehensive survey of condition-specific reproductive isolation reveals genetic incompatibility in yeast. Jing Hou, Anne Friedrich, Jean-Sébastien Gounot, Joseph Schacherer. Nat Commun. 2015, 26 (6):7214.

Population genomics reveals chromosome-scale heterogeneous evolution in a protoploid yeast. Anne Friedrich, Paul Jung, Cyrielle Reisser, Gilles Fischer, Joseph Schacherer. Mol Biol Evol. 2015, 32 (1):184-192.

The fascinating and secret wild life of the budding yeast S. cerevisiae. Gianni Liti. Elife. 2015, 25 (4).

Population genomic analysis reveals highly conserved mitochondrial genomes in the yeast species Lachancea thermotolerans. Kelle C Freel, Anne Friedrich, Jing Hou, Joseph Schacherer. Genome Biol Evol. 2014, 6 (10):2586-2594.

Chromosomal rearrangements as a major mechanism in the onset of reproductive isolation in Saccharomyces cerevisiae. Jing Hou, Anne Friedrich, Jacky de Montigny, Joseph Schacherer. Current Biology. 2014, 24(10):1153-9.

A high-definition view of functional genetic variation from natural yeast genomes. Anders Bergström, Jared T Simpson, Francisco Salinas, Benjamin Barré, Leopold Parts, Amin Zia, Alex N Nguyen Ba, Alan M Moses, Edward J Louis, Ville Mustonen, Jonas Warringer, Richard Durbin, Gianni Liti. Mol. Biol. Evol., 2014, 31(4):872-88.

Genome-wide analysis of intraspecific transposon diversity in yeast. Claudine Bleykasten-Grosshans, Anne Friedrich, Joseph Schacherer. BMC Genomics. 2013, 14:399.

Comparative mitochondrial genomics within and among yeast species of the Lachancea genus. Anne Friedrich, Paul P Jung, Jing Hou, Cécile Neuvéglise, Joseph Schacherer. PLoS One. 2012, 7(10):e47834.

The rise of yeast population genomics. Gianni Liti, Joseph Schacherer. C R Biol. 2011, 334(8-9):612-9.

Comprehensive polymorphism survey elucidates population structure of Saccharomyces cerevisiae. Joseph Schacherer, Joshua A Shapiro, Douglas M Ruderfer DM, Leonid Kruglyak. Nature. 2009 Mar 19;458(7236):342-5.

Population genomics of domestic and wild yeasts. Gianni Liti, David M Carter, Alan M Moses, Jonas Warringer, Leopold Parts, Stephen A James, Robert P Davey, Ian N Roberts, Austin Burt, Vassiliki Koufopanou, Isheng J Tsai, Casey M Bergman, Douda Bensasson, Michael J T O’Kelly, Alexander van Oudenaarden, David B H Barton, Elizabeth Bailes, Alex N Nguyen, Matthew Jones, Michael A Quail, Ian Goodhead, Sarah Sims, Frances Smith, Anders Blomberg, Richard Durbin and Edward J Louis. Nature. 2009. 19;458(7236):337-41.